STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO64965.1Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily. (173 aa)    
Predicted Functional Partners:
SDO48540.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.964
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
    0.868
SDO64928.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
       0.865
SDO65047.1
TIGR00255 family protein.
       0.865
SDO17402.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.675
SDO65086.1
PAS domain-containing protein.
       0.668
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
  0.642
SDO53262.1
Hypothetical protein.
    
  0.581
SDO64891.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
       0.565
SDO14096.1
Dihydropyrimidinase.
  
    0.503
Your Current Organism:
Sulfitobacter litoralis
NCBI taxonomy Id: 335975
Other names: DSM 17584, KCTC 12521, S. litoralis, Sulfitobacter litoralis Park et al. 2007, strain Iso 3
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