Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO15096.1 | SDP06354.1 | SAMN04488512_101143 | SAMN04488512_10936 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Hydroxymethylpyrimidine kinase. | 0.731 |
SDO15096.1 | SDP06432.1 | SAMN04488512_101143 | SAMN04488512_10938 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Sulfur carrier protein. | 0.975 |
SDO15096.1 | SDP06506.1 | SAMN04488512_101143 | SAMN04488512_10940 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiamine-phosphate diphosphorylase. | 0.696 |
SDO15096.1 | SDP06616.1 | SAMN04488512_101143 | SAMN04488512_10943 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.573 |
SDO15096.1 | SDP20361.1 | SAMN04488512_101143 | SAMN04488512_11127 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Haem-NO-binding. | 0.490 |
SDO15096.1 | SDP41118.1 | SAMN04488512_101143 | SAMN04488512_11584 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiamine-phosphate pyrophosphorylase. | 0.564 |
SDO15096.1 | thiG | SAMN04488512_101143 | SAMN04488512_10939 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.977 |
SDP06354.1 | SDO15096.1 | SAMN04488512_10936 | SAMN04488512_101143 | Hydroxymethylpyrimidine kinase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.731 |
SDP06354.1 | SDP06396.1 | SAMN04488512_10936 | SAMN04488512_10937 | Hydroxymethylpyrimidine kinase. | Glycine oxidase. | 0.916 |
SDP06354.1 | SDP06432.1 | SAMN04488512_10936 | SAMN04488512_10938 | Hydroxymethylpyrimidine kinase. | Sulfur carrier protein. | 0.994 |
SDP06354.1 | SDP06506.1 | SAMN04488512_10936 | SAMN04488512_10940 | Hydroxymethylpyrimidine kinase. | Thiamine-phosphate diphosphorylase. | 0.999 |
SDP06354.1 | SDP06541.1 | SAMN04488512_10936 | SAMN04488512_10941 | Hydroxymethylpyrimidine kinase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.943 |
SDP06354.1 | SDP06616.1 | SAMN04488512_10936 | SAMN04488512_10943 | Hydroxymethylpyrimidine kinase. | Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.999 |
SDP06354.1 | SDP20361.1 | SAMN04488512_10936 | SAMN04488512_11127 | Hydroxymethylpyrimidine kinase. | Haem-NO-binding. | 0.556 |
SDP06354.1 | SDP41118.1 | SAMN04488512_10936 | SAMN04488512_11584 | Hydroxymethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase. | 0.971 |
SDP06354.1 | thiG | SAMN04488512_10936 | SAMN04488512_10939 | Hydroxymethylpyrimidine kinase. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.997 |
SDP06396.1 | SDP06354.1 | SAMN04488512_10937 | SAMN04488512_10936 | Glycine oxidase. | Hydroxymethylpyrimidine kinase. | 0.916 |
SDP06396.1 | SDP06432.1 | SAMN04488512_10937 | SAMN04488512_10938 | Glycine oxidase. | Sulfur carrier protein. | 0.978 |
SDP06396.1 | SDP06506.1 | SAMN04488512_10937 | SAMN04488512_10940 | Glycine oxidase. | Thiamine-phosphate diphosphorylase. | 0.971 |
SDP06396.1 | SDP06541.1 | SAMN04488512_10937 | SAMN04488512_10941 | Glycine oxidase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.940 |
page 1 of 4