STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP13701.1Segregation and condensation protein B. (198 aa)    
Predicted Functional Partners:
SDP40161.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
 
 0.989
SDP13744.1
Protein of unknown function.
 
     0.940
SDP13778.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
 
     0.873
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 
 0.793
SDP62052.1
Protein of unknown function.
 
     0.751
SDP62003.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.749
SDP76261.1
Protein of unknown function.
 
     0.749
SDP76282.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.748
cmk
Cytidylate kinase.
  
  
 0.509
SDP13664.1
Putative transposase.
 
     0.488
Your Current Organism:
Sulfitobacter litoralis
NCBI taxonomy Id: 335975
Other names: DSM 17584, KCTC 12521, S. litoralis, Sulfitobacter litoralis Park et al. 2007, strain Iso 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.