STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP15503.1Protein of unknown function. (309 aa)    
Predicted Functional Partners:
SDP15568.1
Hypothetical protein.
 
     0.913
SDP15224.1
Methyltransferase domain-containing protein.
 
     0.772
SDP15359.1
Protein of unknown function.
 
     0.771
SDP14519.1
Hypothetical protein.
 
     0.770
SDP14352.1
Hypothetical protein.
  
     0.767
SDP14253.1
Chromosome partitioning protein, ParB family.
 
     0.762
SDP15606.1
Hypothetical protein.
  
     0.755
SDP15638.1
Type IV secretion system T-DNA border endonuclease VirD2.
  
     0.752
SDP15262.1
Hypothetical protein.
  
     0.746
SDP15329.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Sulfitobacter litoralis
NCBI taxonomy Id: 335975
Other names: DSM 17584, KCTC 12521, S. litoralis, Sulfitobacter litoralis Park et al. 2007, strain Iso 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.