STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP19845.1Glycine betaine/proline transport system ATP-binding protein. (342 aa)    
Predicted Functional Partners:
SDP19883.1
Glycine betaine/proline transport system permease protein.
 0.999
SDP19918.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.999
SDP71693.1
Glycine betaine/proline transport system permease protein.
 0.996
SDP71671.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.992
SDP19812.1
Drug/metabolite transporter, DME family.
    
  0.599
betI
Transcriptional regulator, TetR family; Repressor involved in choline regulation of the bet genes.
 
     0.556
SDP05811.1
Osmoprotectant transport system substrate-binding protein.
  
 
  0.554
SDP05844.1
Osmoprotectant transport system permease protein.
 
 0.525
SDP05918.1
Osmoprotectant transport system permease protein.
 
 0.520
potA-2
Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  
 
0.403
Your Current Organism:
Sulfitobacter litoralis
NCBI taxonomy Id: 335975
Other names: DSM 17584, KCTC 12521, S. litoralis, Sulfitobacter litoralis Park et al. 2007, strain Iso 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.