STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP55803.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (561 aa)    
Predicted Functional Partners:
SDP55781.1
Peptide/nickel transport system permease protein.
 
  0.941
SDP55755.1
Peptide/nickel transport system permease protein.
 
 
  0.917
SDP55727.1
Peptide/nickel transport system substrate-binding protein.
 
 
  0.849
SDP55834.1
Hippurate hydrolase.
       0.773
SDP74076.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.723
SDP55861.1
Glutamate carboxypeptidase.
 
     0.710
SDO16763.1
Biotin transport system permease protein.
  
 0.689
SDP77994.1
Peptide/nickel transport system permease protein.
 
 
  0.688
SDP55702.1
Microcystin degradation protein MlrC, contains DUF1485 domain; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.664
SDO95353.1
Peptide/nickel transport system permease protein.
 
 
  0.659
Your Current Organism:
Sulfitobacter litoralis
NCBI taxonomy Id: 335975
Other names: DSM 17584, KCTC 12521, S. litoralis, Sulfitobacter litoralis Park et al. 2007, strain Iso 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.