STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP60086.1Hypothetical protein. (439 aa)    
Predicted Functional Partners:
SDO66017.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
 0.993
SDP60068.1
Hypothetical protein.
 
  
 0.981
SDP60018.1
Protein of unknown function.
 
   
 0.972
SDP59997.1
Short-chain dehydrogenase.
 
   
 0.964
SDP60042.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
 
   
 0.960
ctaG
Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
      0.899
SDO66058.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
 
   
 0.721
SDP28650.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.687
SDO36192.1
cation:H+ antiporter.
   
    0.532
SDO30115.1
Uncaracterized surface protein containing fasciclin (FAS1) repeats.
 
   
 0.517
Your Current Organism:
Sulfitobacter litoralis
NCBI taxonomy Id: 335975
Other names: DSM 17584, KCTC 12521, S. litoralis, Sulfitobacter litoralis Park et al. 2007, strain Iso 3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.