Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atpB | cox1 | SAR11_0116 | SAR11_0134 | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.940 |
| atpB | coxB | SAR11_0116 | SAR11_0135 | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Probable cytochrome c oxidase polypeptide II (Cytochrome aa3 subunit 2); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.958 |
| atpB | coxC | SAR11_0116 | SAR11_0130 | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Cytochrome-c oxidase; Similar to subunit III, coxC Rickettsia. | 0.998 |
| atpB | fbcH | SAR11_0116 | SAR11_0098 | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Ubiquinol-cytochrome-c reductase. | 0.523 |
| atpB | fdsB | SAR11_0116 | SAR11_0680 | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | NAD-dependent formate dehydrogenase beta subunit. | 0.513 |
| atpB | nuoH | SAR11_0116 | SAR11_0890 | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | NADH Dehydrogenase I Chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. | 0.975 |
| atpB | nuoM | SAR11_0116 | SAR11_0896 | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | NADH Dehydrogenase I Chain M. | 0.986 |
| atpB | petA | SAR11_0116 | SAR11_0100 | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Cytochrome b6-f complex iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.431 |
| atpB | petB | SAR11_0116 | SAR11_0099 | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Ubiquinol-cytochrome-c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.981 |
| cox1 | atpB | SAR11_0134 | SAR11_0116 | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.940 |
| cox1 | coxB | SAR11_0134 | SAR11_0135 | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Probable cytochrome c oxidase polypeptide II (Cytochrome aa3 subunit 2); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
| cox1 | coxC | SAR11_0134 | SAR11_0130 | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Cytochrome-c oxidase; Similar to subunit III, coxC Rickettsia. | 0.999 |
| cox1 | cytC | SAR11_0134 | SAR11_1184 | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Cytochrome c. | 0.976 |
| cox1 | fbcH | SAR11_0134 | SAR11_0098 | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Ubiquinol-cytochrome-c reductase. | 0.993 |
| cox1 | fdsB | SAR11_0134 | SAR11_0680 | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | NAD-dependent formate dehydrogenase beta subunit. | 0.993 |
| cox1 | nuoH | SAR11_0134 | SAR11_0890 | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | NADH Dehydrogenase I Chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. | 0.965 |
| cox1 | nuoM | SAR11_0134 | SAR11_0896 | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | NADH Dehydrogenase I Chain M. | 0.987 |
| cox1 | petA | SAR11_0134 | SAR11_0100 | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Cytochrome b6-f complex iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.991 |
| cox1 | petB | SAR11_0134 | SAR11_0099 | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Ubiquinol-cytochrome-c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
| coxB | atpB | SAR11_0135 | SAR11_0116 | Probable cytochrome c oxidase polypeptide II (Cytochrome aa3 subunit 2); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | H+-transporting two-sector ATPase (subunit A); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.958 |
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