STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ21083.1Possible transmembrane protein. (59 aa)    
Predicted Functional Partners:
AAZ21084.1
Amidase; Unknown specificity; similar to gatA.
       0.773
AAZ21085.1
Mannitol transporter; Large chain.
       0.768
AAZ21086.1
Mannitol transporter; Small chain.
       0.768
AAZ21082.1
Transporter; Drug/Metabolite Exporter family.
       0.757
AAZ21081.1
Unknown protein.
       0.586
AAZ21087.1
TRAP dicarboxylate transporter - DctP subunit (mannitol/chloroaromatic compounds); Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
       0.535
Your Current Organism:
Pelagibacter ubique HTCC1062
NCBI taxonomy Id: 335992
Other names: C. Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique str. HTCC1062, Candidatus Pelagibacter ubique strain HTCC1062
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.