STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltDGlutamate synthase (NADPH) beta chain. (479 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase large subunit.
 0.999
AAZ20965.1
Ferredoxin-dependent glutamate synthase peptide; GltB-like protein; Belongs to the glutamate synthase family.
 
 
 0.986
fdxB
Ferredoxin; Similar to 2Fe-2S Caulobacter crescentus CB15.
    
 0.984
AAZ22112.1
Glutamate synthase large subunit-like protein; GlxD-like protein; Belongs to the glutamate synthase family.
 
 
 0.981
glxD
Glutamate synthase large subunit; Belongs to the glutamate synthase family.
 
 
 0.981
gdhA
Glutamate dehydrogenase [NAD(P)] precursor; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.953
AAZ22109.1
GlnT-like protein; Belongs to the glutamine synthetase family.
  
 
 0.950
aspC
Probable aspartate transaminase.
  
 
 0.947
fdsB
NAD-dependent formate dehydrogenase beta subunit.
 
  
 0.945
fdhF
Formate dehydrogenase Alpha subunit (fdhF-2).
    
 0.921
Your Current Organism:
Pelagibacter ubique HTCC1062
NCBI taxonomy Id: 335992
Other names: C. Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique str. HTCC1062, Candidatus Pelagibacter ubique strain HTCC1062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.