STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhbGProbable sulfate/thiosulfate import ATP-binding protein cysA; YhbG. (258 aa)    
Predicted Functional Partners:
AAZ21533.1
Predicted permease YjgP/YjgQ family protein.
   
 0.994
AAZ21534.1
Predicted permease YjgP/YjgQ family protein.
   
 0.994
braE
Branched-chain amino acid transport protein; Belongs to the binding-protein-dependent transport system permease family.
 
      0.896
gutQ
Arabinose 5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
 
    0.845
rnd
Ribonuclease D.
       0.797
AAZ21318.1
Unknown protein.
       0.773
AAZ21321.1
Probable NADH-ubiquinone oxireductase.
       0.614
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RP009.
 
  
 0.600
lpxA
Acyl-[acyl carrier protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
  
 0.600
himD
Integration host factor beta-subunit (IHF-beta); Belongs to the bacterial histone-like protein family.
       0.523
Your Current Organism:
Pelagibacter ubique HTCC1062
NCBI taxonomy Id: 335992
Other names: C. Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique str. HTCC1062, Candidatus Pelagibacter ubique strain HTCC1062
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.