STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ21442.1GcvT-like Aminomethyltransferase protein; Belongs to the GcvT family. (295 aa)    
Predicted Functional Partners:
nadC
Quinolinate phosphoribosyl transferase; Belongs to the NadC/ModD family.
       0.615
nadA
Quinolinate synthetase A protein; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.615
pyrC2
Dihydroorotase.
       0.610
gcvP
Glycine cleavage system protein P2 gcvP; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
  
 0.569
hesB
hesB protein; Belongs to the HesB/IscA family.
 
 
 0.520
gcvT
Glycine cleavage system protein T2.
     
 0.509
pdhD
Dihydrolipoyl dehydrogenase.
   
 
  0.502
AAZ21776.1
HesB-like domain; Belongs to the HesB/IscA family.
 
 
 0.500
ndufs4
ETC complex I subunit conserved region.
  
     0.495
grlA
Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
  
   
 0.411
Your Current Organism:
Pelagibacter ubique HTCC1062
NCBI taxonomy Id: 335992
Other names: C. Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique str. HTCC1062, Candidatus Pelagibacter ubique strain HTCC1062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.