STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ21585.1Short chain dehydrogenase; Unknown specificity. (248 aa)    
Predicted Functional Partners:
hpaG
Fumarylacetoacetate hydrolase family protein.
  
  0.930
AAZ21685.1
Short chain dehydrogenase; Unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.902
AAZ21663.1
Short chain dehydrogenase; Unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.901
AAZ21879.1
O-methyltransferase.
 
  
   0.889
yajF
Probable NAGC-like transcription regulator.
  
  
 0.776
gabD
Succinate-semialdehyde dehydrogenase (NAD(P)).
 
   0.672
fabD
[acyl-carrier-protein] S-malonyltransferase.
 
 
 0.508
AAZ21591.1
Short chain dehydrogenase; Unknown specificity.
 
    
0.505
ucpA
Oxidoreductase.
 
    
0.489
edd
6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
     0.465
Your Current Organism:
Pelagibacter ubique HTCC1062
NCBI taxonomy Id: 335992
Other names: C. Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique str. HTCC1062, Candidatus Pelagibacter ubique strain HTCC1062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.