STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauATaurine transport system periplasmic protein. (313 aa)    
Predicted Functional Partners:
tauC
Probable taurine uptake ABC transporter permease protein.
 
 
 0.994
tauB
Probable taurin uptake ABC transporter ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
 
 0.992
AAZ21661.1
Thiamine pyrophosphate-requiring enzyme; Belongs to the TPP enzyme family.
  
     0.761
AAZ22150.1
Hypothetical protein; Similar to COG0730: Predicted permeases.
  
     0.699
AAZ21582.1
Possible deoxygenase.
  
     0.684
AAZ22073.1
Conserved hypothetical protein; Similar to Pseudomonas putida KT2440 gb|AAN68299.1.
  
     0.644
bioA
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.535
AAZ22067.1
Probable dioxygenase alpha chain.
  
     0.533
comC
Malate/L-sulfolactate dehydrogenase multifunction enzyme; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.515
hisD2
Histidinol dehydrogenase 2.
  
     0.470
Your Current Organism:
Pelagibacter ubique HTCC1062
NCBI taxonomy Id: 335992
Other names: C. Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique str. HTCC1062, Candidatus Pelagibacter ubique strain HTCC1062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.