node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
infA | rplQ | SAR11_0476 | SAR11_1092 | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein L17. | 0.935 |
infA | rplU | SAR11_0476 | SAR11_0220 | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.815 |
infA | rpoA | SAR11_0476 | SAR11_1093 | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.962 |
infA | rpsB | SAR11_0476 | SAR11_0907 | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Probable 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.991 |
infA | rpsF | SAR11_0476 | SAR11_0705 | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.849 |
infA | rpsI | SAR11_0476 | SAR11_1028 | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.824 |
infA | rpsK | SAR11_0476 | SAR11_1094 | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
infA | rpsO | SAR11_0476 | SAR11_0391 | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.990 |
infA | rpsP | SAR11_0476 | SAR11_0255 | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.765 |
rplQ | infA | SAR11_1092 | SAR11_0476 | Ribosomal protein L17. | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.935 |
rplQ | rplU | SAR11_1092 | SAR11_0220 | Ribosomal protein L17. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.998 |
rplQ | rpoA | SAR11_1092 | SAR11_1093 | Ribosomal protein L17. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.994 |
rplQ | rpsA | SAR11_1092 | SAR11_0492 | Ribosomal protein L17. | 30S ribosomal protein S1. | 0.974 |
rplQ | rpsB | SAR11_1092 | SAR11_0907 | Ribosomal protein L17. | Probable 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.997 |
rplQ | rpsF | SAR11_1092 | SAR11_0705 | Ribosomal protein L17. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.997 |
rplQ | rpsI | SAR11_1092 | SAR11_1028 | Ribosomal protein L17. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
rplQ | rpsK | SAR11_1092 | SAR11_1094 | Ribosomal protein L17. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplQ | rpsO | SAR11_1092 | SAR11_0391 | Ribosomal protein L17. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |
rplQ | rpsP | SAR11_1092 | SAR11_0255 | Ribosomal protein L17. | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.998 |
rplU | infA | SAR11_0220 | SAR11_0476 | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.815 |