STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ22032.1ADP-ribosylglycohydrolase. (317 aa)    
Predicted Functional Partners:
AAZ22030.1
Conserved hypothetical protein; Similar to Sinorhizobium meliloti pir||E95408.
 
     0.863
dinF
DNA-damage inducible protein F.
       0.773
AAZ20996.1
Unknown protein.
  
     0.672
ruvC
Crossover junction endodeoxyribonuclease.
  
     0.651
AAZ22034.1
Hydroxyacylglutathione hydrolase; Putative glyoxalase II.
       0.651
AAZ22025.1
Fimbrial protein pilin.
  
     0.616
AAZ21453.1
Conserved hypothetical protein.
  
     0.567
AAZ21249.1
Thioesterase superfamily protein.
 
     0.532
AAZ20947.1
Possible transmembrane protein; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family.
  
     0.531
speE
Spermine/spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.507
Your Current Organism:
Pelagibacter ubique HTCC1062
NCBI taxonomy Id: 335992
Other names: C. Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique HTCC1062, Candidatus Pelagibacter ubique str. HTCC1062, Candidatus Pelagibacter ubique strain HTCC1062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.