Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAZ22043.1 | AAZ22045.1 | SAR11_1239 | SAR11_1241 | Unknown. | Unknown. | 0.529 |
AAZ22043.1 | aceA | SAR11_1239 | SAR11_1240 | Unknown. | Isocitrate lyase. | 0.642 |
AAZ22043.1 | sfuA | SAR11_1239 | SAR11_1236 | Unknown. | iron(III) ABC transporter; Similar to ATP-binding protein Vibrio vulnificus YJ016 dbj|BAC95508.1. | 0.400 |
AAZ22043.1 | sfuB | SAR11_1239 | SAR11_1237 | Unknown. | iron(III) ABC transporter; Similar to permease protein VC0609 Vibrio cholerae. | 0.400 |
AAZ22043.1 | sfuC | SAR11_1239 | SAR11_1238 | Unknown. | Probable iron-uptake ABC transport system periplasmic iron-binding protein. | 0.527 |
AAZ22045.1 | AAZ22043.1 | SAR11_1241 | SAR11_1239 | Unknown. | Unknown. | 0.529 |
AAZ22045.1 | aceA | SAR11_1241 | SAR11_1240 | Unknown. | Isocitrate lyase. | 0.631 |
aceA | AAZ22043.1 | SAR11_1240 | SAR11_1239 | Isocitrate lyase. | Unknown. | 0.642 |
aceA | AAZ22045.1 | SAR11_1240 | SAR11_1241 | Isocitrate lyase. | Unknown. | 0.631 |
aceA | sfuC | SAR11_1240 | SAR11_1238 | Isocitrate lyase. | Probable iron-uptake ABC transport system periplasmic iron-binding protein. | 0.446 |
sfuA | AAZ22043.1 | SAR11_1236 | SAR11_1239 | iron(III) ABC transporter; Similar to ATP-binding protein Vibrio vulnificus YJ016 dbj|BAC95508.1. | Unknown. | 0.400 |
sfuA | sfuB | SAR11_1236 | SAR11_1237 | iron(III) ABC transporter; Similar to ATP-binding protein Vibrio vulnificus YJ016 dbj|BAC95508.1. | iron(III) ABC transporter; Similar to permease protein VC0609 Vibrio cholerae. | 0.995 |
sfuA | sfuC | SAR11_1236 | SAR11_1238 | iron(III) ABC transporter; Similar to ATP-binding protein Vibrio vulnificus YJ016 dbj|BAC95508.1. | Probable iron-uptake ABC transport system periplasmic iron-binding protein. | 0.991 |
sfuB | AAZ22043.1 | SAR11_1237 | SAR11_1239 | iron(III) ABC transporter; Similar to permease protein VC0609 Vibrio cholerae. | Unknown. | 0.400 |
sfuB | sfuA | SAR11_1237 | SAR11_1236 | iron(III) ABC transporter; Similar to permease protein VC0609 Vibrio cholerae. | iron(III) ABC transporter; Similar to ATP-binding protein Vibrio vulnificus YJ016 dbj|BAC95508.1. | 0.995 |
sfuB | sfuC | SAR11_1237 | SAR11_1238 | iron(III) ABC transporter; Similar to permease protein VC0609 Vibrio cholerae. | Probable iron-uptake ABC transport system periplasmic iron-binding protein. | 0.998 |
sfuC | AAZ22043.1 | SAR11_1238 | SAR11_1239 | Probable iron-uptake ABC transport system periplasmic iron-binding protein. | Unknown. | 0.527 |
sfuC | aceA | SAR11_1238 | SAR11_1240 | Probable iron-uptake ABC transport system periplasmic iron-binding protein. | Isocitrate lyase. | 0.446 |
sfuC | sfuA | SAR11_1238 | SAR11_1236 | Probable iron-uptake ABC transport system periplasmic iron-binding protein. | iron(III) ABC transporter; Similar to ATP-binding protein Vibrio vulnificus YJ016 dbj|BAC95508.1. | 0.991 |
sfuC | sfuB | SAR11_1238 | SAR11_1237 | Probable iron-uptake ABC transport system periplasmic iron-binding protein. | iron(III) ABC transporter; Similar to permease protein VC0609 Vibrio cholerae. | 0.998 |