STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX90323.1Cobaltochelatase CobT subunit. (622 aa)    
Predicted Functional Partners:
SCX90252.1
Cobaltochelatase CobS subunit.
 
 
 0.990
cobB
Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
  0.939
SCY30097.1
Cobaltochelatase CobN subunit.
     
 0.927
SCX90353.1
D-lactate dehydrogenase (cytochrome).
       0.773
SCY50028.1
DnaJ domain-containing protein.
 
     0.770
SCY48944.1
GcrA cell cycle regulator.
  
     0.691
SCY51329.1
DNA polymerase III, chi subunit.
  
     0.689
SCY74082.1
Hypothetical protein.
  
     0.656
SCX89780.1
Hypothetical protein.
  
     0.632
SCY78677.1
Hypothetical protein.
  
     0.628
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.