STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY08332.1Protocatechuate 3,4-dioxygenase, beta subunit. (237 aa)    
Predicted Functional Partners:
SCY08305.1
Protocatechuate 3,4-dioxygenase, alpha subunit.
 
0.999
SCY08239.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.997
SCY08188.1
P-hydroxybenzoate 3-monooxygenase.
 
  
 0.987
SCY08364.1
4-carboxymuconolactone decarboxylase.
 
 
 0.985
SCY08393.1
3-oxoadipate enol-lactonase.
 
  
 0.973
SCY08270.1
Uncharacterized conserved protein, DUF849 family.
 
     0.889
SCY08415.1
LysR family transcriptional regulator, pca operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
 
     0.793
SCY30451.1
Glyoxalase family protein.
     
 0.693
SCY67904.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
 0.636
SCY86395.1
3-oxoacid CoA-transferase subunit A.
  
 
 0.548
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.