STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY11908.1Transcriptional regulator, GntR family. (231 aa)    
Predicted Functional Partners:
SCY11940.1
Transcriptional regulator, GntR family.
 
    
0.817
SCY96273.1
DNA-binding transcriptional regulator, GntR family.
  
     0.772
SCY91783.1
DNA-binding transcriptional regulator, FadR family.
  
    0.766
SCY88105.1
DNA-binding transcriptional regulator, GntR family.
  
     0.760
SCY92619.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
    0.758
SCX87163.1
Transcriptional regulator, GntR family.
  
     0.707
SCY94349.1
DNA-binding transcriptional regulator, GntR family.
  
     0.699
SCY62555.1
DNA-binding transcriptional regulator, FadR family.
  
    0.659
SCY11893.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.527
SCY11857.1
Tripartite tricarboxylate transporter TctB family protein.
       0.420
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.