Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCY14423.1 | SCY14450.1 | SAMN05660710_00819 | SAMN05660710_00820 | Hypothetical protein. | Hypothetical protein. | 0.623 |
SCY14423.1 | SCY14512.1 | SAMN05660710_00819 | SAMN05660710_00822 | Hypothetical protein. | Sec-independent protein translocase protein TatB. | 0.623 |
SCY14423.1 | tatA | SAMN05660710_00819 | SAMN05660710_00823 | Hypothetical protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.581 |
SCY14423.1 | tatC | SAMN05660710_00819 | SAMN05660710_00821 | Hypothetical protein. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.630 |
SCY14450.1 | SCY14423.1 | SAMN05660710_00820 | SAMN05660710_00819 | Hypothetical protein. | Hypothetical protein. | 0.623 |
SCY14450.1 | SCY14512.1 | SAMN05660710_00820 | SAMN05660710_00822 | Hypothetical protein. | Sec-independent protein translocase protein TatB. | 0.864 |
SCY14450.1 | SCY14581.1 | SAMN05660710_00820 | SAMN05660710_00824 | Hypothetical protein. | Multiple antibiotic resistance protein. | 0.479 |
SCY14450.1 | tatA | SAMN05660710_00820 | SAMN05660710_00823 | Hypothetical protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.831 |
SCY14450.1 | tatC | SAMN05660710_00820 | SAMN05660710_00821 | Hypothetical protein. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.864 |
SCY14512.1 | SCY14423.1 | SAMN05660710_00822 | SAMN05660710_00819 | Sec-independent protein translocase protein TatB. | Hypothetical protein. | 0.623 |
SCY14512.1 | SCY14450.1 | SAMN05660710_00822 | SAMN05660710_00820 | Sec-independent protein translocase protein TatB. | Hypothetical protein. | 0.864 |
SCY14512.1 | SCY14581.1 | SAMN05660710_00822 | SAMN05660710_00824 | Sec-independent protein translocase protein TatB. | Multiple antibiotic resistance protein. | 0.479 |
SCY14512.1 | secD | SAMN05660710_00822 | SAMN05660710_00721 | Sec-independent protein translocase protein TatB. | Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.431 |
SCY14512.1 | tatA | SAMN05660710_00822 | SAMN05660710_00823 | Sec-independent protein translocase protein TatB. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.998 |
SCY14512.1 | tatC | SAMN05660710_00822 | SAMN05660710_00821 | Sec-independent protein translocase protein TatB. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.999 |
SCY14512.1 | yidC | SAMN05660710_00822 | SAMN05660710_03000 | Sec-independent protein translocase protein TatB. | Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.415 |
SCY14581.1 | SCY14450.1 | SAMN05660710_00824 | SAMN05660710_00820 | Multiple antibiotic resistance protein. | Hypothetical protein. | 0.479 |
SCY14581.1 | SCY14512.1 | SAMN05660710_00824 | SAMN05660710_00822 | Multiple antibiotic resistance protein. | Sec-independent protein translocase protein TatB. | 0.479 |
SCY14581.1 | SCY53280.1 | SAMN05660710_00824 | SAMN05660710_01864 | Multiple antibiotic resistance protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.410 |
SCY14581.1 | tatA | SAMN05660710_00824 | SAMN05660710_00823 | Multiple antibiotic resistance protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.513 |
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