STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY23022.1D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (529 aa)    
Predicted Functional Partners:
SCY22990.1
Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
 0.996
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.886
SCX96597.1
Aspartate aminotransferase.
 
 
  0.739
SCY23060.1
Serine/threonine protein phosphatase 1.
 
    0.722
SCY67625.1
Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.
    
 0.719
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
 0.718
SCY95981.1
Probable phosphoglycerate mutase.
    
  0.701
SCY78802.1
Aromatic-amino-acid transaminase.
   
  0.671
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
   
  
 0.659
SCY22966.1
Phosphoserine phosphatase.
  
 0.646
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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