Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX87102.1 | SCY08818.1 | SAMN05660710_00062 | SAMN05660710_00629 | Hypothetical protein. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 0.738 |
SCX87102.1 | SCY47166.1 | SAMN05660710_00062 | SAMN05660710_01632 | Hypothetical protein. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 0.738 |
SCX87102.1 | SCY53280.1 | SAMN05660710_00062 | SAMN05660710_01864 | Hypothetical protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.773 |
SCX93181.1 | SCY08818.1 | SAMN05660710_00262 | SAMN05660710_00629 | Ferredoxin, 2Fe-2S. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 0.676 |
SCX93181.1 | SCY47166.1 | SAMN05660710_00262 | SAMN05660710_01632 | Ferredoxin, 2Fe-2S. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 0.715 |
SCY08818.1 | SCX87102.1 | SAMN05660710_00629 | SAMN05660710_00062 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | Hypothetical protein. | 0.738 |
SCY08818.1 | SCX93181.1 | SAMN05660710_00629 | SAMN05660710_00262 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | Ferredoxin, 2Fe-2S. | 0.676 |
SCY08818.1 | SCY08857.1 | SAMN05660710_00629 | SAMN05660710_00630 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | Ferredoxin, 2Fe-2S. | 0.931 |
SCY08818.1 | SCY09695.1 | SAMN05660710_00629 | SAMN05660710_00664 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.738 |
SCY08818.1 | SCY47166.1 | SAMN05660710_00629 | SAMN05660710_01632 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 0.731 |
SCY08818.1 | SCY53280.1 | SAMN05660710_00629 | SAMN05660710_01864 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | Glutamate synthase (NADPH/NADH) large chain. | 0.668 |
SCY08818.1 | SCY53311.1 | SAMN05660710_00629 | SAMN05660710_01865 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.970 |
SCY08818.1 | SCY53337.1 | SAMN05660710_00629 | SAMN05660710_01866 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | Nitrite reductase (NADH) small subunit. | 0.889 |
SCY08818.1 | SCY76580.1 | SAMN05660710_00629 | SAMN05660710_02664 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | Nitronate monooxygenase. | 0.709 |
SCY08857.1 | SCY08818.1 | SAMN05660710_00630 | SAMN05660710_00629 | Ferredoxin, 2Fe-2S. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 0.931 |
SCY08857.1 | SCY47166.1 | SAMN05660710_00630 | SAMN05660710_01632 | Ferredoxin, 2Fe-2S. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 0.701 |
SCY09695.1 | SCY08818.1 | SAMN05660710_00664 | SAMN05660710_00629 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 0.738 |
SCY09695.1 | SCY47166.1 | SAMN05660710_00664 | SAMN05660710_01632 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 0.738 |
SCY09695.1 | SCY53280.1 | SAMN05660710_00664 | SAMN05660710_01864 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.773 |
SCY47140.1 | SCY47166.1 | SAMN05660710_01631 | SAMN05660710_01632 | 16S rRNA (guanine966-N2)-methyltransferase. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. | 0.663 |
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