STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY48788.1Putative signal transducing protein. (69 aa)    
Predicted Functional Partners:
SCY48808.1
tRNA1(Val) A37 N6-methylase TrmN6; Belongs to the methyltransferase superfamily.
       0.864
SCY48826.1
Hypothetical protein.
 
     0.785
SCY48753.1
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.733
SCY48558.1
TIGR02302 family protein.
 
     0.603
SCY73056.1
N-terminal double-transmembrane domain-containing protein.
  
     0.563
SCY83669.1
Signal transduction histidine kinase.
  
     0.508
rsmI
16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
    0.494
SCY40913.1
Hypothetical protein.
  
     0.484
SCX90596.1
Uncharacterized protein involved in cysteine biosynthesis.
  
     0.479
SCY73074.1
Hypothetical protein.
  
     0.468
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.