Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCY00067.1 | SCY50364.1 | SAMN05660710_00505 | SAMN05660710_01747 | 3-methyladenine DNA glycosylase AlkD. | TfoX C-terminal domain-containing protein. | 0.673 |
SCY13444.1 | SCY50364.1 | SAMN05660710_00786 | SAMN05660710_01747 | H-type lectin domain-containing protein. | TfoX C-terminal domain-containing protein. | 0.413 |
SCY47451.1 | SCY50364.1 | SAMN05660710_01643 | SAMN05660710_01747 | Hpt domain-containing protein. | TfoX C-terminal domain-containing protein. | 0.423 |
SCY50308.1 | SCY50332.1 | SAMN05660710_01745 | SAMN05660710_01746 | Protein of unknown function. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.768 |
SCY50308.1 | SCY50364.1 | SAMN05660710_01745 | SAMN05660710_01747 | Protein of unknown function. | TfoX C-terminal domain-containing protein. | 0.502 |
SCY50332.1 | SCY50308.1 | SAMN05660710_01746 | SAMN05660710_01745 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Protein of unknown function. | 0.768 |
SCY50332.1 | SCY50364.1 | SAMN05660710_01746 | SAMN05660710_01747 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | TfoX C-terminal domain-containing protein. | 0.506 |
SCY50364.1 | SCY00067.1 | SAMN05660710_01747 | SAMN05660710_00505 | TfoX C-terminal domain-containing protein. | 3-methyladenine DNA glycosylase AlkD. | 0.673 |
SCY50364.1 | SCY13444.1 | SAMN05660710_01747 | SAMN05660710_00786 | TfoX C-terminal domain-containing protein. | H-type lectin domain-containing protein. | 0.413 |
SCY50364.1 | SCY47451.1 | SAMN05660710_01747 | SAMN05660710_01643 | TfoX C-terminal domain-containing protein. | Hpt domain-containing protein. | 0.423 |
SCY50364.1 | SCY50308.1 | SAMN05660710_01747 | SAMN05660710_01745 | TfoX C-terminal domain-containing protein. | Protein of unknown function. | 0.502 |
SCY50364.1 | SCY50332.1 | SAMN05660710_01747 | SAMN05660710_01746 | TfoX C-terminal domain-containing protein. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.506 |
SCY50364.1 | miaB | SAMN05660710_01747 | SAMN05660710_01748 | TfoX C-terminal domain-containing protein. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.555 |
miaB | SCY50364.1 | SAMN05660710_01748 | SAMN05660710_01747 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | TfoX C-terminal domain-containing protein. | 0.555 |