STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY62555.1DNA-binding transcriptional regulator, FadR family. (258 aa)    
Predicted Functional Partners:
SCY65316.1
Transcriptional regulator, GntR family.
  
     0.743
SCY92619.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
     0.741
SCX97772.1
Transcriptional regulator, GntR family.
  
    0.689
SCY62494.1
Transcriptional regulator, GntR family.
  
    0.681
SCY11908.1
Transcriptional regulator, GntR family.
  
    0.659
SCY51991.1
Transcriptional regulator, GntR family.
  
    0.630
SCY31611.1
DNA-binding transcriptional regulator, GntR family.
  
    0.629
SCY11940.1
Transcriptional regulator, GntR family.
  
    0.606
SCY62572.1
C4-dicarboxylate-binding protein DctP.
 
     0.602
SCY00190.1
Transcriptional regulator, GntR family.
  
    0.594
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.