STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY71195.1Ferritin-like metal-binding protein YciE. (171 aa)    
Predicted Functional Partners:
SCY82252.1
Ferritin-like metal-binding protein YciE.
 
  
 0.934
SCY24530.1
Ferritin-like metal-binding protein YciE.
 
  
0.891
SCY41019.1
Mn-containing catalase.
 
    0.816
SCY71184.1
NADH dehydrogenase.
 
     0.804
SCY71181.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.508
SCY92373.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
     0.403
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
Server load: low (28%) [HD]