STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY72338.1iron(III) transport system substrate-binding protein. (341 aa)    
Predicted Functional Partners:
SCY72355.1
Two-component system, OmpR family, sensor histidine kinase TctE.
  
  0.990
SCY72372.1
Two component transcriptional regulator, winged helix family.
 
  
  0.914
SCY96006.1
iron(III) transport system permease protein.
  
 
 0.874
SCY01107.1
iron(III) transport system permease protein.
  
 
 0.862
SCY72416.1
Putative tricarboxylic transport membrane protein.
 
     0.769
SCY29364.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.690
SCY72385.1
Putative tricarboxylic transport membrane protein.
 
     0.671
SCY72444.1
Protein of unknown function.
       0.635
SCY72459.1
Protein of unknown function.
       0.635
potA
Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 
 0.627
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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