Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX96129.1 | SCY82182.1 | SAMN05660710_00358 | SAMN05660710_02948 | Acyl-coenzyme A thioesterase PaaI, contains HGG motif. | ferredoxin--NADP+ reductase. | 0.463 |
SCY53337.1 | SCY82157.1 | SAMN05660710_01866 | SAMN05660710_02946 | Nitrite reductase (NADH) small subunit. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.546 |
SCY53337.1 | SCY82182.1 | SAMN05660710_01866 | SAMN05660710_02948 | Nitrite reductase (NADH) small subunit. | ferredoxin--NADP+ reductase. | 0.495 |
SCY59896.1 | SCY82145.1 | SAMN05660710_02037 | SAMN05660710_02945 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.478 |
SCY59896.1 | SCY82157.1 | SAMN05660710_02037 | SAMN05660710_02946 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.550 |
SCY59896.1 | SCY82182.1 | SAMN05660710_02037 | SAMN05660710_02948 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | ferredoxin--NADP+ reductase. | 0.571 |
SCY60335.1 | SCY77160.1 | SAMN05660710_02056 | SAMN05660710_02693 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | phenylacetate-CoA ligase. | 0.482 |
SCY60335.1 | SCY82182.1 | SAMN05660710_02056 | SAMN05660710_02948 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | ferredoxin--NADP+ reductase. | 0.486 |
SCY77160.1 | SCY60335.1 | SAMN05660710_02693 | SAMN05660710_02056 | phenylacetate-CoA ligase. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.482 |
SCY77160.1 | SCY82182.1 | SAMN05660710_02693 | SAMN05660710_02948 | phenylacetate-CoA ligase. | ferredoxin--NADP+ reductase. | 0.509 |
SCY82104.1 | SCY82130.1 | SAMN05660710_02942 | SAMN05660710_02944 | Arsenate reductase. | Protein of unknown function. | 0.544 |
SCY82104.1 | SCY82145.1 | SAMN05660710_02942 | SAMN05660710_02945 | Arsenate reductase. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.544 |
SCY82104.1 | SCY82157.1 | SAMN05660710_02942 | SAMN05660710_02946 | Arsenate reductase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.544 |
SCY82104.1 | SCY82170.1 | SAMN05660710_02942 | SAMN05660710_02947 | Arsenate reductase. | Protein of unknown function. | 0.544 |
SCY82104.1 | SCY82182.1 | SAMN05660710_02942 | SAMN05660710_02948 | Arsenate reductase. | ferredoxin--NADP+ reductase. | 0.518 |
SCY82130.1 | SCY82104.1 | SAMN05660710_02944 | SAMN05660710_02942 | Protein of unknown function. | Arsenate reductase. | 0.544 |
SCY82130.1 | SCY82145.1 | SAMN05660710_02944 | SAMN05660710_02945 | Protein of unknown function. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.902 |
SCY82130.1 | SCY82157.1 | SAMN05660710_02944 | SAMN05660710_02946 | Protein of unknown function. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.917 |
SCY82130.1 | SCY82170.1 | SAMN05660710_02944 | SAMN05660710_02947 | Protein of unknown function. | Protein of unknown function. | 0.910 |
SCY82130.1 | SCY82182.1 | SAMN05660710_02944 | SAMN05660710_02948 | Protein of unknown function. | ferredoxin--NADP+ reductase. | 0.784 |
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