STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY83121.1Site-specific DNA recombinase. (557 aa)    
Predicted Functional Partners:
SCY83108.1
Protein of unknown function.
 
     0.948
SCY83081.1
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.882
SCY93913.1
Protein of unknown function.
 
     0.781
SCY83063.1
Hypothetical protein.
 
     0.604
SCY61667.1
Phage portal protein, lambda family.
  
    0.529
SCY96891.1
Site-specific DNA recombinase.
  
     0.493
SCY83095.1
Hypothetical protein.
       0.454
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.