Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCY07682.1 | SCY52243.1 | SAMN05660710_00591 | SAMN05660710_01822 | Ornithine cyclodeaminase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.821 |
SCY07682.1 | SCY69343.1 | SAMN05660710_00591 | SAMN05660710_02416 | Ornithine cyclodeaminase. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.888 |
SCY07682.1 | SCY84836.1 | SAMN05660710_00591 | SAMN05660710_03070 | Ornithine cyclodeaminase. | Arginase; Belongs to the arginase family. | 0.975 |
SCY52243.1 | SCY07682.1 | SAMN05660710_01822 | SAMN05660710_00591 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Ornithine cyclodeaminase. | 0.821 |
SCY52243.1 | SCY84781.1 | SAMN05660710_01822 | SAMN05660710_03066 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.433 |
SCY52243.1 | SCY84836.1 | SAMN05660710_01822 | SAMN05660710_03070 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Arginase; Belongs to the arginase family. | 0.896 |
SCY52243.1 | SCY93171.1 | SAMN05660710_01822 | SAMN05660710_03524 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Ornithine cyclodeaminase. | 0.716 |
SCY52243.1 | SCY94496.1 | SAMN05660710_01822 | SAMN05660710_03621 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Ornithine cyclodeaminase. | 0.716 |
SCY52243.1 | argD | SAMN05660710_01822 | SAMN05660710_01694 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.622 |
SCY52243.1 | argH | SAMN05660710_01822 | SAMN05660710_01686 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Argininosuccinate lyase. | 0.441 |
SCY53280.1 | SCY69343.1 | SAMN05660710_01864 | SAMN05660710_02416 | Glutamate synthase (NADPH/NADH) large chain. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.939 |
SCY53280.1 | SCY84781.1 | SAMN05660710_01864 | SAMN05660710_03066 | Glutamate synthase (NADPH/NADH) large chain. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.654 |
SCY53280.1 | SCY84836.1 | SAMN05660710_01864 | SAMN05660710_03070 | Glutamate synthase (NADPH/NADH) large chain. | Arginase; Belongs to the arginase family. | 0.825 |
SCY53280.1 | argD | SAMN05660710_01864 | SAMN05660710_01694 | Glutamate synthase (NADPH/NADH) large chain. | acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.745 |
SCY53280.1 | argH | SAMN05660710_01864 | SAMN05660710_01686 | Glutamate synthase (NADPH/NADH) large chain. | Argininosuccinate lyase. | 0.742 |
SCY53280.1 | argJ | SAMN05660710_01864 | SAMN05660710_01669 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.638 |
SCY69343.1 | SCY07682.1 | SAMN05660710_02416 | SAMN05660710_00591 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Ornithine cyclodeaminase. | 0.888 |
SCY69343.1 | SCY53280.1 | SAMN05660710_02416 | SAMN05660710_01864 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.939 |
SCY69343.1 | SCY84781.1 | SAMN05660710_02416 | SAMN05660710_03066 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.410 |
SCY69343.1 | SCY84836.1 | SAMN05660710_02416 | SAMN05660710_03070 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Arginase; Belongs to the arginase family. | 0.866 |
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