STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY90195.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
SCY90042.1
Type IV secretion system protein VirB6.
  
     0.774
SCY90088.1
Type IV secretion system protein VirB8.
  
     0.774
SCY90101.1
Type IV secretion system protein VirB5.
  
     0.774
SCY90024.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
     0.773
SCY90077.1
Type IV secretion system protein VirB9.
  
     0.773
SCY90131.1
Type IV secretion system protein VirB4.
  
     0.773
SCY90033.1
Type IV secretion system protein VirD4.
  
     0.772
SCY90063.1
Type IV secretion system protein VirB10.
  
     0.772
SCY90142.1
Type IV secretion system protein VirB3.
  
     0.772
SCY90013.1
Helix-turn-helix domain of resolvase.
  
     0.771
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.