STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY91517.1Rhamnose-binding protein. (328 aa)    
Predicted Functional Partners:
SCY12517.1
PAS/PAC sensor hybrid histidine kinase.
   
 0.967
SCY68587.1
PAS domain S-box-containing protein.
   
 0.967
SCY91492.1
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.
  0.952
SCY66195.1
PAS domain S-box-containing protein.
   
 0.943
SCY94056.1
PAS domain S-box-containing protein.
   
 0.943
SCY91500.1
Rhamnose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  0.942
SCY91530.1
Transcriptional regulator, DeoR family.
 
     0.911
SCY91476.1
Sugar (pentulose or hexulose) kinase.
 
    0.906
SCY07602.1
Signal transduction histidine kinase.
   
 0.904
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
    0.904
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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