Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCY09723.1 | SCY53773.1 | SAMN05660710_00665 | SAMN05660710_01883 | 4-hydroxyphenylpyruvate dioxygenase. | Acyl transferase domain-containing protein. | 0.592 |
SCY09723.1 | SCY59391.1 | SAMN05660710_00665 | SAMN05660710_02014 | 4-hydroxyphenylpyruvate dioxygenase. | methylmalonyl-CoA mutase. | 0.829 |
SCY09723.1 | SCY70948.1 | SAMN05660710_00665 | SAMN05660710_02420 | 4-hydroxyphenylpyruvate dioxygenase. | Xylose isomerase-like TIM barrel. | 0.762 |
SCY09723.1 | SCY74244.1 | SAMN05660710_00665 | SAMN05660710_02617 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase. | 0.994 |
SCY09723.1 | SCY78802.1 | SAMN05660710_00665 | SAMN05660710_02787 | 4-hydroxyphenylpyruvate dioxygenase. | Aromatic-amino-acid transaminase. | 0.932 |
SCY09723.1 | SCY95772.1 | SAMN05660710_00665 | SAMN05660710_03694 | 4-hydroxyphenylpyruvate dioxygenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.678 |
SCY09723.1 | hisC | SAMN05660710_00665 | SAMN05660710_00391 | 4-hydroxyphenylpyruvate dioxygenase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.723 |
SCY53773.1 | SCY09723.1 | SAMN05660710_01883 | SAMN05660710_00665 | Acyl transferase domain-containing protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.592 |
SCY53773.1 | SCY70948.1 | SAMN05660710_01883 | SAMN05660710_02420 | Acyl transferase domain-containing protein. | Xylose isomerase-like TIM barrel. | 0.643 |
SCY53773.1 | SCY95772.1 | SAMN05660710_01883 | SAMN05660710_03694 | Acyl transferase domain-containing protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.643 |
SCY59391.1 | SCY09723.1 | SAMN05660710_02014 | SAMN05660710_00665 | methylmalonyl-CoA mutase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.829 |
SCY59391.1 | SCY70948.1 | SAMN05660710_02014 | SAMN05660710_02420 | methylmalonyl-CoA mutase. | Xylose isomerase-like TIM barrel. | 0.833 |
SCY59391.1 | SCY95772.1 | SAMN05660710_02014 | SAMN05660710_03694 | methylmalonyl-CoA mutase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.833 |
SCY67625.1 | SCY70948.1 | SAMN05660710_02326 | SAMN05660710_02420 | Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family. | Xylose isomerase-like TIM barrel. | 0.652 |
SCY67625.1 | SCY78802.1 | SAMN05660710_02326 | SAMN05660710_02787 | Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family. | Aromatic-amino-acid transaminase. | 0.774 |
SCY67625.1 | SCY95772.1 | SAMN05660710_02326 | SAMN05660710_03694 | Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family. | 4-hydroxyphenylpyruvate dioxygenase. | 0.652 |
SCY70948.1 | SCY09723.1 | SAMN05660710_02420 | SAMN05660710_00665 | Xylose isomerase-like TIM barrel. | 4-hydroxyphenylpyruvate dioxygenase. | 0.762 |
SCY70948.1 | SCY53773.1 | SAMN05660710_02420 | SAMN05660710_01883 | Xylose isomerase-like TIM barrel. | Acyl transferase domain-containing protein. | 0.643 |
SCY70948.1 | SCY59391.1 | SAMN05660710_02420 | SAMN05660710_02014 | Xylose isomerase-like TIM barrel. | methylmalonyl-CoA mutase. | 0.833 |
SCY70948.1 | SCY67625.1 | SAMN05660710_02420 | SAMN05660710_02326 | Xylose isomerase-like TIM barrel. | Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.652 |
page 1 of 3