STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY95800.1ChrR Cupin-like domain-containing protein. (170 aa)    
Predicted Functional Partners:
SCY95810.1
Regulatory protein, Fis family.
 
     0.715
SCY95838.1
Branched-chain amino acid transport system substrate-binding protein.
 
     0.650
SCY95825.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.551
SCY95905.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.544
SCY08549.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.459
SCY08584.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
     0.459
SCY95850.1
Branched-chain amino acid transport system ATP-binding protein.
 
     0.423
SCY86044.1
Hypothetical protein.
    
 0.414
SCY95892.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.414
Your Current Organism:
Paracoccus tibetensis
NCBI taxonomy Id: 336292
Other names: CGMCC 1.8925, NBRC 105667, P. tibetensis, Paracoccus sp. Tibet-S9a3, Paracoccus tibetensis Zhu et al. 2013, strain Tibet-S9a3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.