STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG75093.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)    
Predicted Functional Partners:
KRG75080.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.967
KRG75094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.873
KRG75079.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.865
KRG75078.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.788
KRG78436.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
KRG75077.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.736
KRG79617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.712
KRG76911.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
KRG78341.1
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
    
 0.429
KRG75076.1
Sodium:proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
       0.429
Your Current Organism:
Stenotrophomonas ginsengisoli
NCBI taxonomy Id: 336566
Other names: DSM 24757, KCTC 12539, NBRC 101154, Stenotrophomonas ginsengisoli Kim et al. 2010, strain DCY01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.