STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG73906.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)    
Predicted Functional Partners:
KRG74021.1
Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
KRG79215.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.655
KRG74044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
KRG73907.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.614
KRG73905.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.611
KRG79399.1
Membrane protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
KRG76606.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.578
KRG79474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
KRG76029.1
Lppc lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
KRG75059.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0250 family.
  
     0.543
Your Current Organism:
Stenotrophomonas ginsengisoli
NCBI taxonomy Id: 336566
Other names: DSM 24757, KCTC 12539, NBRC 101154, Stenotrophomonas ginsengisoli Kim et al. 2010, strain DCY01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.