Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F9X0V8_ZYMTI | F9X4R1_ZYMTI | F9X0V8 | F9X4R1 | Uncharacterized protein. | RRM domain-containing protein. | 0.995 |
F9X0V8_ZYMTI | F9X8L0_ZYMTI | F9X0V8 | F9X8L0 | Uncharacterized protein. | Uncharacterized protein. | 0.997 |
F9X0V8_ZYMTI | F9X9G5_ZYMTI | F9X0V8 | F9X9G5 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.980 |
F9X0V8_ZYMTI | F9XBT4_ZYMTI | F9X0V8 | F9XBT4 | Uncharacterized protein. | SF3b1 domain-containing protein. | 0.866 |
F9X0V8_ZYMTI | F9XCB8_ZYMTI | F9X0V8 | F9XCB8 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.955 |
F9X0V8_ZYMTI | F9XGG8_ZYMTI | F9X0V8 | F9XGG8 | Uncharacterized protein. | Uncharacterized protein. | 0.969 |
F9X0V8_ZYMTI | F9XIC9_ZYMTI | F9X0V8 | F9XIC9 | Uncharacterized protein. | Uncharacterized protein. | 0.882 |
F9X0V8_ZYMTI | F9XJS8_ZYMTI | F9X0V8 | F9XJS8 | Uncharacterized protein. | Uncharacterized protein. | 0.984 |
F9X0V8_ZYMTI | F9XMX0_ZYMTI | F9X0V8 | F9XMX0 | Uncharacterized protein. | Uncharacterized protein. | 0.985 |
F9X0V8_ZYMTI | F9XN79_ZYMTI | F9X0V8 | F9XN79 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.991 |
F9X4R1_ZYMTI | F9X0V8_ZYMTI | F9X4R1 | F9X0V8 | RRM domain-containing protein. | Uncharacterized protein. | 0.995 |
F9X4R1_ZYMTI | F9X8L0_ZYMTI | F9X4R1 | F9X8L0 | RRM domain-containing protein. | Uncharacterized protein. | 0.995 |
F9X4R1_ZYMTI | F9X9G5_ZYMTI | F9X4R1 | F9X9G5 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.997 |
F9X4R1_ZYMTI | F9XBT4_ZYMTI | F9X4R1 | F9XBT4 | RRM domain-containing protein. | SF3b1 domain-containing protein. | 0.944 |
F9X4R1_ZYMTI | F9XCB8_ZYMTI | F9X4R1 | F9XCB8 | RRM domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.997 |
F9X4R1_ZYMTI | F9XGG8_ZYMTI | F9X4R1 | F9XGG8 | RRM domain-containing protein. | Uncharacterized protein. | 0.965 |
F9X4R1_ZYMTI | F9XIC9_ZYMTI | F9X4R1 | F9XIC9 | RRM domain-containing protein. | Uncharacterized protein. | 0.945 |
F9X4R1_ZYMTI | F9XJS8_ZYMTI | F9X4R1 | F9XJS8 | RRM domain-containing protein. | Uncharacterized protein. | 0.995 |
F9X4R1_ZYMTI | F9XMX0_ZYMTI | F9X4R1 | F9XMX0 | RRM domain-containing protein. | Uncharacterized protein. | 0.986 |
F9X4R1_ZYMTI | F9XN79_ZYMTI | F9X4R1 | F9XN79 | RRM domain-containing protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.998 |
page 1 of 6