STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F9XPJ3_ZYMTIFCP1 homology domain-containing protein. (492 aa)    
Predicted Functional Partners:
F9X8Y5_ZYMTI
LNS2 domain-containing protein.
    
 0.955
F9XL06_ZYMTI
Uncharacterized protein.
    
 0.921
F9X3R3_ZYMTI
Uncharacterized protein.
    
 0.839
F9X7F4_ZYMTI
Uncharacterized protein.
    
 0.683
F9X075_ZYMTI
RPOL4c domain-containing protein.
    
 0.625
F9X0P7_ZYMTI
Uncharacterized protein.
    
 0.624
F9XF11_ZYMTI
RNA_pol_L_2 domain-containing protein.
    
 0.585
GTG2401
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.580
F9WZ77_ZYMTI
Uncharacterized protein.
   
 0.574
F9XDH6_ZYMTI
Uncharacterized protein.
   
 0.566
Your Current Organism:
Zymoseptoria tritici IPO323
NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323
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