STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F9XPW4_ZYMTIProtein kinase domain-containing protein. (313 aa)    
Predicted Functional Partners:
F9X7G0_ZYMTI
CID domain-containing protein.
    
 
 0.708
F9XDL1_ZYMTI
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
   
 0.699
GTG2401
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.687
F9X1X3_ZYMTI
Uncharacterized protein; Belongs to the cyclin family.
    
 0.686
F9X389_ZYMTI
Cyclin N-terminal domain-containing protein.
    
 0.686
F9XL69_ZYMTI
Uncharacterized protein.
    
 0.686
F9XH99_ZYMTI
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.678
GTA2401
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.664
F9XGP2_ZYMTI
Uncharacterized protein.
    
 0.664
F9WWV9_ZYMTI
RPOLD domain-containing protein.
    
 0.647
Your Current Organism:
Zymoseptoria tritici IPO323
NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.