Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY42078.1 | SDY42107.1 | SAMN05444412_101102 | SAMN05444412_101103 | Hypothetical protein. | Thioredoxin. | 0.943 |
SDY42078.1 | SDY42133.1 | SAMN05444412_101102 | SAMN05444412_101104 | Hypothetical protein. | Inosine/xanthosine triphosphatase. | 0.542 |
SDY42078.1 | SDY42160.1 | SAMN05444412_101102 | SAMN05444412_101105 | Hypothetical protein. | DNA-binding regulatory protein, YebC/PmpR family. | 0.458 |
SDY42107.1 | SDY42078.1 | SAMN05444412_101103 | SAMN05444412_101102 | Thioredoxin. | Hypothetical protein. | 0.943 |
SDY42107.1 | SDY42133.1 | SAMN05444412_101103 | SAMN05444412_101104 | Thioredoxin. | Inosine/xanthosine triphosphatase. | 0.542 |
SDY42107.1 | SDY42160.1 | SAMN05444412_101103 | SAMN05444412_101105 | Thioredoxin. | DNA-binding regulatory protein, YebC/PmpR family. | 0.475 |
SDY42107.1 | SDY42194.1 | SAMN05444412_101103 | SAMN05444412_101106 | Thioredoxin. | NADH dehydrogenase. | 0.646 |
SDY42133.1 | SDY42078.1 | SAMN05444412_101104 | SAMN05444412_101102 | Inosine/xanthosine triphosphatase. | Hypothetical protein. | 0.542 |
SDY42133.1 | SDY42107.1 | SAMN05444412_101104 | SAMN05444412_101103 | Inosine/xanthosine triphosphatase. | Thioredoxin. | 0.542 |
SDY42133.1 | SDY42160.1 | SAMN05444412_101104 | SAMN05444412_101105 | Inosine/xanthosine triphosphatase. | DNA-binding regulatory protein, YebC/PmpR family. | 0.642 |
SDY42133.1 | SDY42194.1 | SAMN05444412_101104 | SAMN05444412_101106 | Inosine/xanthosine triphosphatase. | NADH dehydrogenase. | 0.437 |
SDY42133.1 | SDY54822.1 | SAMN05444412_101104 | SAMN05444412_101496 | Inosine/xanthosine triphosphatase. | dephospho-CoA kinase. | 0.577 |
SDY42133.1 | SDZ46964.1 | SAMN05444412_101104 | SAMN05444412_1165 | Inosine/xanthosine triphosphatase. | Hypothetical protein. | 0.662 |
SDY42133.1 | SDZ56375.1 | SAMN05444412_101104 | SAMN05444412_12521 | Inosine/xanthosine triphosphatase. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase. | 0.583 |
SDY42160.1 | SDY42078.1 | SAMN05444412_101105 | SAMN05444412_101102 | DNA-binding regulatory protein, YebC/PmpR family. | Hypothetical protein. | 0.458 |
SDY42160.1 | SDY42107.1 | SAMN05444412_101105 | SAMN05444412_101103 | DNA-binding regulatory protein, YebC/PmpR family. | Thioredoxin. | 0.475 |
SDY42160.1 | SDY42133.1 | SAMN05444412_101105 | SAMN05444412_101104 | DNA-binding regulatory protein, YebC/PmpR family. | Inosine/xanthosine triphosphatase. | 0.642 |
SDY42160.1 | SDY42194.1 | SAMN05444412_101105 | SAMN05444412_101106 | DNA-binding regulatory protein, YebC/PmpR family. | NADH dehydrogenase. | 0.521 |
SDY42194.1 | SDY42107.1 | SAMN05444412_101106 | SAMN05444412_101103 | NADH dehydrogenase. | Thioredoxin. | 0.646 |
SDY42194.1 | SDY42133.1 | SAMN05444412_101106 | SAMN05444412_101104 | NADH dehydrogenase. | Inosine/xanthosine triphosphatase. | 0.437 |
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