STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY42289.1Glutamate synthase (NADPH/NADH) small chain. (494 aa)    
Predicted Functional Partners:
SDY42325.1
Glutamate synthase (NADH) large subunit.
 0.999
SDZ46914.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 0.984
SDY52184.1
Ferredoxin, 2Fe-2S.
    
 0.976
SDY97117.1
Ferredoxin, 2Fe-2S.
    
 0.976
SDZ57696.1
Ferredoxin-nitrate reductase.
   
 0.960
SDZ17120.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.945
SDZ27691.1
Electron transfer flavoprotein beta subunit.
   
 
 0.941
SDY68566.1
Glutamate dehydrogenase (NAD(P)+).
  
 0.928
SDY89691.1
Glutamine synthetase.
    
 0.895
SDY45283.1
Glutamine--fructose-6-phosphate transaminase.
    
 0.880
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.