STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY42390.1Single-strand binding protein. (151 aa)    
Predicted Functional Partners:
SDY73514.1
DNA polymerase III, alpha subunit.
  
 0.988
SDZ07384.1
Replication restart DNA helicase PriA.
  
 
 0.957
SDZ49282.1
DNA polymerase III, alpha subunit.
    
 0.931
SDY95667.1
DNA polymerase-3 subunit gamma/tau.
    
 0.887
SDY95692.1
Hypothetical protein.
    
 0.887
SDZ11327.1
DNA polymerase-3 subunit delta'.
    
 0.887
SDY71722.1
RNase HI.
 
 
 
 0.814
SDY74489.1
SSU ribosomal protein S10P.
  
 
 0.806
SDZ19992.1
SSU ribosomal protein S6P.
  
  
 0.787
SDY74432.1
SSU ribosomal protein S7P.
  
   0.768
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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