Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY42390.1 | SDY71722.1 | SAMN05444412_101112 | SAMN05444412_102349 | Single-strand binding protein. | RNase HI. | 0.814 |
SDY42390.1 | SDY73514.1 | SAMN05444412_101112 | SAMN05444412_102408 | Single-strand binding protein. | DNA polymerase III, alpha subunit. | 0.988 |
SDY42390.1 | SDY74432.1 | SAMN05444412_101112 | SAMN05444412_102442 | Single-strand binding protein. | SSU ribosomal protein S7P. | 0.768 |
SDY42390.1 | SDY74489.1 | SAMN05444412_101112 | SAMN05444412_102444 | Single-strand binding protein. | SSU ribosomal protein S10P. | 0.806 |
SDY42390.1 | SDY95667.1 | SAMN05444412_101112 | SAMN05444412_10446 | Single-strand binding protein. | DNA polymerase-3 subunit gamma/tau. | 0.887 |
SDY42390.1 | SDY95692.1 | SAMN05444412_101112 | SAMN05444412_10447 | Single-strand binding protein. | Hypothetical protein. | 0.887 |
SDY42390.1 | SDZ07384.1 | SAMN05444412_101112 | SAMN05444412_105168 | Single-strand binding protein. | Replication restart DNA helicase PriA. | 0.957 |
SDY42390.1 | SDZ11327.1 | SAMN05444412_101112 | SAMN05444412_10626 | Single-strand binding protein. | DNA polymerase-3 subunit delta'. | 0.887 |
SDY42390.1 | SDZ19992.1 | SAMN05444412_101112 | SAMN05444412_107156 | Single-strand binding protein. | SSU ribosomal protein S6P. | 0.787 |
SDY42390.1 | SDZ49282.1 | SAMN05444412_101112 | SAMN05444412_11768 | Single-strand binding protein. | DNA polymerase III, alpha subunit. | 0.931 |
SDY71722.1 | SDY42390.1 | SAMN05444412_102349 | SAMN05444412_101112 | RNase HI. | Single-strand binding protein. | 0.814 |
SDY71722.1 | SDY73514.1 | SAMN05444412_102349 | SAMN05444412_102408 | RNase HI. | DNA polymerase III, alpha subunit. | 0.788 |
SDY71722.1 | SDY95667.1 | SAMN05444412_102349 | SAMN05444412_10446 | RNase HI. | DNA polymerase-3 subunit gamma/tau. | 0.492 |
SDY71722.1 | SDY95692.1 | SAMN05444412_102349 | SAMN05444412_10447 | RNase HI. | Hypothetical protein. | 0.492 |
SDY71722.1 | SDZ11327.1 | SAMN05444412_102349 | SAMN05444412_10626 | RNase HI. | DNA polymerase-3 subunit delta'. | 0.492 |
SDY71722.1 | SDZ49282.1 | SAMN05444412_102349 | SAMN05444412_11768 | RNase HI. | DNA polymerase III, alpha subunit. | 0.480 |
SDY73514.1 | SDY42390.1 | SAMN05444412_102408 | SAMN05444412_101112 | DNA polymerase III, alpha subunit. | Single-strand binding protein. | 0.988 |
SDY73514.1 | SDY71722.1 | SAMN05444412_102408 | SAMN05444412_102349 | DNA polymerase III, alpha subunit. | RNase HI. | 0.788 |
SDY73514.1 | SDY95667.1 | SAMN05444412_102408 | SAMN05444412_10446 | DNA polymerase III, alpha subunit. | DNA polymerase-3 subunit gamma/tau. | 0.999 |
SDY73514.1 | SDY95692.1 | SAMN05444412_102408 | SAMN05444412_10447 | DNA polymerase III, alpha subunit. | Hypothetical protein. | 0.999 |
page 1 of 4