STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY42993.1Sugar phosphate isomerase/epimerase. (287 aa)    
Predicted Functional Partners:
SDY42958.1
Predicted dehydrogenase.
 
 
  0.859
SDZ12864.1
Oxidoreductase family, NAD-binding Rossmann fold.
  
 
  0.615
SDY97859.1
Predicted dehydrogenase.
  
 
  0.586
SDZ18074.1
Predicted dehydrogenase.
  
 
  0.584
SDZ36874.1
Predicted dehydrogenase.
  
 
  0.560
SDZ34848.1
Predicted dehydrogenase.
  
 
  0.557
SDY98801.1
Predicted dehydrogenase.
  
 
  0.531
SDZ48737.1
Oxidoreductase family, NAD-binding Rossmann fold.
  
 
  0.522
SDZ43444.1
Oxidoreductase family, NAD-binding Rossmann fold.
  
 
  0.490
SDZ10856.1
Protein of unknown function.
  
     0.488
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.