STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY47721.1Glucose-fructose oxidoreductase. (367 aa)    
Predicted Functional Partners:
SDZ41457.1
Predicted dehydrogenase.
  
     0.750
SDY98942.1
6-phosphogluconate dehydrogenase.
  
  
  0.572
SDY47758.1
Uncharacterized conserved protein GlcG, DUF336 family.
       0.530
SDZ12582.1
Galactokinase.
   
   0.439
SDZ56232.1
Sugar phosphate isomerase/epimerase.
  
 
  0.413
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.