STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY47826.1Para-nitrobenzyl esterase. (544 aa)    
Predicted Functional Partners:
SDZ45855.1
Guanylate kinase.
  
 
  0.883
SDY75210.1
SSU ribosomal protein S4P.
    
  0.875
SDZ53631.1
ATP-dependent helicase HrpB.
    
 0.860
SDY75188.1
SSU ribosomal protein S11P.
    
  0.859
SDZ33505.1
N-acetylated-alpha-linked acidic dipeptidase.
  
  0.796
SDZ36397.1
Peptidase family M28.
  
  0.770
SDZ00716.1
3'-5' exonuclease.
    
  0.730
SDZ01104.1
Allosteric NADP-dependent malic enzyme.
     
 0.725
SDY42021.1
Peptidase family M28.
   
  0.702
SDY55158.1
Peptidase family M28.
   
  0.702
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.