STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY40090.1Phosphoglycerate mutase. (499 aa)    
Predicted Functional Partners:
SDY75311.1
Enolase.
  
 0.984
SDZ14724.1
Phosphoglycerate kinase.
  
 
 0.976
SDZ42726.1
Putative mRNA 3-end processing factor.
   
 0.969
SDZ43533.1
WD-40 repeat-containing protein.
    
 0.954
SDZ52656.1
Nucleoside phosphorylase.
    
 0.954
SDY65476.1
Triosephosphate isomerase.
  
 0.925
SDZ50601.1
D-3-phosphoglycerate dehydrogenase.
  
 
 0.911
SDZ37956.1
Glucose-6-phosphate isomerase.
  
 
 0.909
SDY86336.1
Fructose-bisphosphate aldolase.
   
 
 0.891
SDZ19264.1
Transaldolase.
    
 0.886
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.