STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY40689.1XTP/dITP diphosphohydrolase. (268 aa)    
Predicted Functional Partners:
SDY85052.1
PAS domain S-box-containing protein.
    
  0.903
SDZ04770.1
Hpt domain-containing protein.
    
  0.903
SDZ39262.1
PAS domain S-box-containing protein.
    
  0.898
SDZ07455.1
TolB amino-terminal domain-containing protein.
  
 
  0.897
SDZ32547.1
PAS domain S-box-containing protein.
    
  0.896
SDZ05226.1
Thymidylate synthase.
   
 
 0.892
SDY72364.1
Hypoxanthine phosphoribosyltransferase.
 
  
  0.886
SDY64993.1
XTP/dITP diphosphohydrolase.
    
  0.858
SDZ42695.1
GMP synthase (glutamine-hydrolysing).
    
  0.857
SDY86516.1
5'-nucleotidase /3'-nucleotidase.
     
 0.854
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.