STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY65273.1Scyllo-inositol 2-dehydrogenase (NADP+). (347 aa)    
Predicted Functional Partners:
SDZ13831.1
Inosose dehydratase.
   
 
  0.878
SDZ56232.1
Sugar phosphate isomerase/epimerase.
   
 
  0.878
SDZ43167.1
Predicted dehydrogenase.
  
  
  0.759
SDZ57443.1
Predicted dehydrogenase.
  
  
 
0.745
SDZ40914.1
Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.
  
  
 
0.741
SDY65243.1
Two component transcriptional regulator, LuxR family.
       0.705
SDY65210.1
Histidine kinase.
       0.620
SDY65306.1
Hypothetical protein.
       0.580
SDZ57481.1
Predicted dehydrogenase.
  
  
  0.565
SDY42958.1
Predicted dehydrogenase.
  
  
 
0.554
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.