STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY65601.1Dehydrogenase (flavoprotein). (370 aa)    
Predicted Functional Partners:
SDY64087.1
Methyltransferase domain-containing protein.
  
 0.888
SDZ27691.1
Electron transfer flavoprotein beta subunit.
  
 
 0.860
SDY64138.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
 
 0.854
SDY64111.1
Predicted naringenin-chalcone synthase.
 
  
 0.771
SDZ27702.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.715
SDZ42987.1
Amino acid adenylation domain-containing protein.
    
 0.714
SDZ43000.1
Amino acid adenylation domain-containing protein.
    
 0.714
SDZ42976.1
Amino acid adenylation domain-containing protein.
    
 0.662
SDY65422.1
Phytoene desaturase.
 
 
 0.640
SDZ57165.1
Geranylgeranyl diphosphate synthase, type II.
 
 0.614
Your Current Organism:
Rhodonellum ikkaensis
NCBI taxonomy Id: 336829
Other names: R. ikkaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.